MMDB files - Biology 482
MMDB files for use with Cn3D - Biology 482
Helix-turn-helix motif proteins
6CRO - Lambda Cro protein bound to DNA
1LMB - Lambda Repressor protein bound to DNA
1B8I - Homeodomain TF (Ultrabithorax homeodomain) bound to DNA
Zinc binding transcription factor proteins
1AAY - Standard Zinc finger (ZIF268) protein bound to DNA (Three Zn fingers)
1R4O - Nuclear hormone receptor (Glucocorticoid receptor) protein bound to DNA
Other transcription factor and DNA binding proteins
1MDY - Basic helix-loop-helix (MyoD) protein bound to DNA
1YSA - Basic Leucine zipper (GCN4) protein bound to DNA
1YSA - Basic Leucine zipper (AP1 - C-FOS/C-JUN heterodimer) protein bound to DNA
1CGP - E. coli CAP + cAMP bound to DNA
1TGH - TBP (TATA binding protein) bound to TATA DNA
Nucleic Acid Polymerases (or subunits)
1D8Y - E. coli DNA Polymerase I Klenow fragment co-crystal with DNA
2POL - E. coli DNA Polymerase III beta subunit dimer
1AXC - Human PCNA (DNA Polymerase processivity factor)