Show picture of predicted genes in PDF file
 FGENESH 2.4 Prediction of potential genes in C_elegans genomic DNA
 Time    :   Sun Apr  9 09:25:02 2006
 Seq name:  test sequence 
 Length of sequence: 30016 
 Number of predicted genes 9 in +chain 2 in -chain 7
 Number of predicted exons 31 in +chain 8 in -chain 23
 Positions of predicted genes and exons: Variant   1 from   1, Score:306.113678 
   G Str   Feature   Start        End    Score           ORF           Len

   1 -      PolA      2089                1.06
   1 -    1 CDSo      2608 -      2928   20.08      2608 -      2928    321
   1 -      TSS       2951               -2.46

   2 -      PolA      3941               -0.44
   2 -    1 CDSo      4153 -      4467   23.22      4153 -      4467    315
   2 -      TSS       4490               -4.36

   3 -      PolA      5513               -0.44
   3 -    1 CDSo      6085 -      6378   21.90      6085 -      6378    294
   3 -      TSS       6408               -4.56

   4 +      TSS       6837               -8.16
   4 +    1 CDSf      7172 -      7284   15.44      7172 -      7282    111
   4 +    2 CDSl      7365 -      7623    9.36      7366 -      7623    258
   4 +      PolA      7639               -3.25

   5 -      PolA      7910                1.06
   5 -    1 CDSl      8057 -      8212   11.30      8057 -      8212    156
   5 -    2 CDSi      8261 -      8458   17.01      8261 -      8458    198
   5 -    3 CDSi      8559 -      8840   16.50      8559 -      8840    282
   5 -    4 CDSi      8887 -      8948   10.50      8887 -      8946     60
   5 -    5 CDSf      9485 -      9518    2.07      9486 -      9518     33
   5 -      TSS      10168              -10.26

   6 -      PolA     10294                1.06
   6 -    1 CDSl     10473 -     10796   11.57     10473 -     10796    324
   6 -    2 CDSi     10847 -     11117   12.21     10847 -     11116    270
   6 -    3 CDSi     11174 -     11358   11.53     11176 -     11358    183
   6 -    4 CDSi     11402 -     11563   19.38     11402 -     11563    162
   6 -    5 CDSf     11613 -     11840   16.60     11613 -     11840    228
   6 -      TSS      11928              -10.06

   7 -      PolA     13714                1.06
   7 -    1 CDSl     14055 -     14066   -5.71     14055 -     14066     12
   7 -    2 CDSi     14362 -     14553   10.55     14362 -     14553    192
   7 -    3 CDSf     14634 -     14780   18.39     14634 -     14780    147
   7 -      TSS      14842              -10.86

   8 +      TSS      16172               -7.86
   8 +    1 CDSf     16507 -     16540    0.21     16507 -     16539     33
   8 +    2 CDSi     16860 -     16958    1.32     16862 -     16957     96
   8 +    3 CDSi     17008 -     17105    6.92     17010 -     17105     96
   8 +    4 CDSi     17150 -     17371   18.00     17150 -     17371    222
   8 +    5 CDSi     17419 -     17521   -6.04     17419 -     17520    102
   8 +    6 CDSl     17579 -     17715    6.63     17581 -     17715    135
   8 +      PolA     18139                1.06

   9 -      PolA     23500                1.06
   9 -    1 CDSl     23652 -     23704    1.08     23652 -     23702     51
   9 -    2 CDSi     23791 -     24330   54.81     23792 -     24328    537
   9 -    3 CDSi     24380 -     24514   10.32     24381 -     24512    132
   9 -    4 CDSi     24581 -     24659    4.17     24582 -     24659     78
   9 -    5 CDSi     24717 -     24971    6.99     24717 -     24971    255
   9 -    6 CDSi     25020 -     25202   17.62     25020 -     25202    183
   9 -    7 CDSf     25252 -     25371   23.90     25252 -     25371    120
   9 -      TSS      26607               -6.46

Predicted protein(s):
>FGENESH:   1   1 exon (s)   2608  -   2928   106 aa, chain -
MRFIPILLIAVLAFIVIIEGCTVGDCDYPERNPRPRPKYPDDDFPYLNGDNNKAGWVSEV
TGVPNYKTCNSDEDCRHDFMELEIPRCTDGKCNNYTPDPSEIGRPF
>FGENESH:   2   1 exon (s)   4153  -   4467   104 aa, chain -
MRFIPILLIAVLAFIAIIEGCLEGDCEHPERNEEPRNDGGDFFNFNGDNNKAGWVSEVTG
VPNYKECKSDKDCRHDFMELEVPRCTDGKCNNYTPDPTKIGRPF
>FGENESH:   3   1 exon (s)   6085  -   6378    97 aa, chain -
MRFIPILLIAVLAFIAIIEGCLEGDCEHPERNEAPRDDGGEFFNFNGDNNKAGFVSEVTG
VPNYKECKSDQDCRYEFMEREVNRCIDGKCNNYTPPY
>FGENESH:   4   2 exon (s)   7172  -   7623   123 aa, chain +
MQLGLNGAKDLNLNVESWSTTINIHQDNKYDEQSGENQCATSSIFENPLIIGVIAIFIHY
LLLWLRNKMTGDGKTNKQTGDTVVHASFEIDGDTYILLKCNNSNDSYSEDFEEQDNEIGE
TYF
>FGENESH:   5   5 exon (s)   8057  -   9518   243 aa, chain -
MIGSLIENLICISSLAPSSPLLKMQSSAAVADAAIAATTVTAAKSGPFLIVVCGGSASGK
TMFAHLLKTRLNSERVFILSMDHFYRNFTEEEKKEILKEEFNFDSPDALDIDCAHDLIVK
MKSGEALVPSMDIIIFEGILSLHDDRIVDMADKKVFVSADEDTRLNRRLTRDARERGRTE
ESTRAQHEKFVEPAYRAYIAPCANKLGTNGLLVENNEGQNLEPHVESLAKEIREEMKWRG
VSL
>FGENESH:   6   5 exon (s)  10473  -  11840   389 aa, chain -
MNRNQNNRIVRVQRRSKEEQKKRERERKRNDKRKDQERLFRKNITYLEPDELRKSFGEFD
EDDALTILERKLPLHQTMVDLMFTQNVKPIQLQNLLKVIQFLTENLGDGFLNVRDRGQDT
VLHRAAYMDVPGLVPYLVEHGASLIEENRRGFTPLQAAVTKKQEGNFKYLLEKGSTFFPV
ISNGMHEEEAFQKAVLRVPALSDIAYRIHWQMGMAVNSTFNSLVRVDQFANRARHSAVMT
VPLNFKEATETKIKFRLHSSHVHEEHCGIEHVLVLFGMTYQRGAFAVRREAVPFTRISMN
GKWLLDYSIKDRTTYPGFFFCIRPKEVNELYIRKNVGELGSDMIAMTLFQYEANRRSCNR
NGCFVAQNMTTQPGHREDWEVGFQEPVVE
>FGENESH:   7   3 exon (s)  14055  -  14780   116 aa, chain -
MDLPRGDQSYNVQKKKELSESLLEMILDTKFTDVAQILKGQNLELIEELAFSSYWEIKDE
VTEKEFESLTKNLLKFLSDVFALLNKIPASYKKLLSCQDNGETLIHWAVRIQNKTR
>FGENESH:   8   6 exon (s)  16507  -  17715   230 aa, chain +
MIEFPVEHLISEPSPGVISLRRYSTPPLLECQDPIVDNVLNVIRSKLPLSEPLHISLVRI
FQRMEGVTLLKVVTFEKSILPFVDNYFKQLCVAHRVPIPNPWKPYFYYFATCYLKTINRP
LKKWEQDLMILKMSSIAGNNDNLPGGYSTTLVNNSSQLIISSDGDSSTQKKKHATVSTDS
YPINPNPTNLKEVSVQMAKNLSKVREIKLKQPQPRFSAKLSKYRRMSAHN
>FGENESH:   9   7 exon (s)  23652  -  25371   454 aa, chain -
MSMKEEVPRDHHNIASLIYVDRNIRCHSTNDDDRLNKDVKFGVLRIFWGEMELPFTEEIE
LRAVKRSVEMKTFMSWEIRLGSSDDQKVFVSIPAHFIWRMLRTKREELKLYPATFMFQLA
QEGMEHLKTSIPDLYESVKKYHKERSKPLPELLFVVLDPANIQFFELGLLLYRYPYEALI
KQFQKVFEKHWADHNKWCMTRYPDPRVVYGPIEEVSGEDFSQLTKRFGLRNYDTKESADG
IRYNIRTYLPRKEAPKKYKKGWHMKKPINETNDGGADKREEDAEDDQEEFVENREMSFDK
KIIYPENLNDFFEEMRKKREMQKKKNRLLKELEDRIVKEKKPKIVKEKKEDEPIEEPKED
PEEEDEDEEVELDVELEKKEDEEEEEIEEEDESSFETDAPSTSTRPARSRQTRRRAPGSA
APSPSLSSENRPRRQRNEPTEIYKATPIRTYKRR


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