Biology 376 - Sequence Analysis Links for Wnt genes discovery


  • Folder with sequence analysis docs and images
  • C. elegans Wnt pathway proteins sequences (in FASTA format)

    P. pacificus Wnt pathway proteins sequences (in FASTA format)

    Pristionchus.org - P. pacificus molecular-genetic database

    Align Two Protein Sequences using BLAST (at NCBI)

    Alliance of Genome Resources - acquire protein sequences from other model organisms here

    WormBase - C. elegans molecular-genetic database

    How to make a multiple sequence alignment (MSA)

    EBI Clustal Omega - multiple seqence alignment (MSA) tool

    NCBI Conserved Domain Search - examine the domain structure of your potential orthologs

    Search InterPro by text - Protein family database

    DNA & Amino acids information - for understanding AA 'similarities' assessed for alignments

    NCBI Blast

    Bio & Chem 330 sequence analysis page - other useful links may be found here